CRISPR Screen Dataset
Hart T (2015) - 3-PMID26627737
Title: High-Resolution CRISPR Screens Reveal Fitness Genes and Genotype-Specific Cancer Liabilities.
Screen Details:
- Screen Rationale : Cell-essential genes
- Cell Type : Glioblastoma Cell Line [BTO:0001530]
- Cell Line : 143B [BTO:0003167, CELLOSAURUS:CVCL_2270]
- Phenotype : Cell Proliferation
- Library : TKO (Toronto Knockout) v1 [AddGene] | Type: CRISPRn | Format: Pool | Enzyme: Cas9 | Methodology: Knockout
- Analysis Method : BAGEL | Number of Hits: 2,197 | Full Dataset Size: 17,215
- Experimental Setup : Timecourse | Duration: 18 Days | MOI: ~ 0.3
- Significance : Authors have indicated that results with Score.1 (Bayes Factor) > 3.2 are to be considered significant. These results are indicated by '' in the HIT column of the table below.
Notes:
- Genes with a Bayes Factor (BF) above the threshold of 3.2 at an FDR of 5% (FDR < 0.05) were identified as fitness genes (hits) for this cell line in this CRISPR screen.
Score Distribution
< 134.469
> -41.813