Related Resources
The Biological General Repository for Interaction Datasets (BioGRID) is an interaction, post-translational modification, and chemical association repository with data compiled through comprehensive curation efforts
This BioGRID project page is designed to allow exploration of the entire yeast kinome and its interactions, including genetic interactions and all mapped sites of protein phosphorylation.
CRISPR Screen data in BioGRID ORCS can be accessed via the BioGRID ORCS REST web service. Screens in various formats can be fetched from the BioGRID ORCS REST Service over HTTPS, programmatically or in a browser.
Latest News
The BioGRID ORCS curated set of data have been updated to include CRISPR screens from a total of 49 different publications. These additions bring our total number of curated CRISPR screens to 895 encompassing 58,000+ genes, 629 different cell lines, and 111 different cell types across 3 different model organism species (Human, Mouse, and Fruit Fly).
New curated data are added in curation updates on a regular basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these CRISPR data, visit our download page or utilize our web service.
The BioGRID's curated set of data have been updated to include interactions, chemical associations, and post-translational modifications (PTM) from 69,922 publications. These additions bring our total number of non-redundant interactions to 1,322,353, raw interactions to 1,706,694, non-redundant chemical associations to 12,015, raw chemical associations to 28,093, Non-Redundant PTM Sites to 367,288, Raw PTM Sites to 668,982 and Un-Assigned PTMs to 57,396.
New curated data are added in curation updates on a monthly basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these data, visit our download page or utilize our web service.
BioGRID update 3.5.173 includes a comprehensive update to our Schizosaccharomyces pombe dataset in partnership with The Scientific Resource for Fission Yeast (PomBase). This update incorporates close to 3,000 new interactions. Moreover, this increases the total number of Schizosaccharomyces pombe interactions deposited in BioGRID to 75,229 from 2,600+ publications. These interactions and all associated meta data are available immediately online via all standard BioGRID searches and supported download formats. You can also find these and many additional fission yeast resources available at https://www.pombase.org.
A special thanks to the PomBase Team for their tireless curation efforts and in particular Antonia Lock, Kim Rutherford and Valerie Wood for directly helping to facilitate the BioGRID collaboration.
If you have an interaction dataset you'd like to deposit directly into the BioGRID, please contact us at biogridadmin@gmail.com.
The BioGRID's curated set of data have been updated to include interactions, chemical associations, and post-translational modifications (PTM) from 69,644 publications. These additions bring our total number of non-redundant interactions to 1,309,311, raw interactions to 1,690,901, non-redundant chemical associations to 12,015, raw chemical associations to 28,093, Non-Redundant PTM Sites to 367,288, Raw PTM Sites to 668,982 and Un-Assigned PTMs to 57,396.
New curated data are added in curation updates on a monthly basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these data, visit our download page or utilize our web service.
The BioGRID's curated set of data have been updated to include interactions, chemical associations, and post-translational modifications (PTM) from 69,438 publications. These additions bring our total number of non-redundant interactions to 1,304,061, raw interactions to 1,683,670, non-redundant chemical associations to 12,015, raw chemical associations to 28,093, Non-Redundant PTM Sites to 367,288, Raw PTM Sites to 668,982 and Un-Assigned PTMs to 57,396.
New curated data are added in curation updates on a monthly basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these data, visit our download page or utilize our web service.
The BioGRID's curated set of data have been updated to include interactions, chemical associations, and post-translational modifications (PTM) from 69,031 publications. These additions bring our total number of non-redundant interactions to 1,299,261, raw interactions to 1,676,780, non-redundant chemical associations to 12,015, raw chemical associations to 28,093, Non-Redundant PTM Sites to 367,288, Raw PTM Sites to 668,982 and Un-Assigned PTMs to 57,396.
New curated data are added in curation updates on a monthly basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these data, visit our download page or utilize our web service.
The BioGRID's curated set of data have been updated to include interactions, chemical associations, and post-translational modifications (PTM) from 68,754 publications. These additions bring our total number of non-redundant interactions to 1,294,082, raw interactions to 1,670,339, non-redundant chemical associations to 12,015, raw chemical associations to 28,093, Non-Redundant PTM Sites to 367,288, Raw PTM Sites to 668,982 and Un-Assigned PTMs to 57,396.
New curated data are added in curation updates on a monthly basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these data, visit our download page or utilize our web service.
Gene Info is an open source extension for the Chrome web browser that allows automated retrieval of gene annotation information for any gene name, synonym or supported accession number on an open web page within Chrome. Searching or double-clicking on text terms retrieves gene function annotation, GO terms, external database links, and interaction data drawn from BioGRID and IntAct. Retrieved gene names are automatically hyperlinked for rapid recursive searches.
GeneInfo is fully open source, available online at GitHub and is downloadable here. Tutorial videos and a step-by-step guide is available online. GeneInfo was developed by James Knight in the Gingras Lab at the Lunenfeld-Tanenbaum Research Institute in Toronto, Canada.
The BioGRID ORCS curated set of data have been updated to include CRISPR screens from a total of 43 different publications. These additions bring our total number of curated CRISPR screens to 561 encompassing 58,000+ genes, 431 different cell lines, and 113 different cell types across 3 different model organisms species (Human, Mouse, and Fruit Fly).
New curated data are added in curation updates on a regular basis. For a more comprehensive breakdown of our numbers, check out our latest statistics. To download these CRISPR data, visit our download page or utilize our web service.
